| Station | Subway entrance | ||
| S1 | Ueno (JR line) | M1 | Todai-mae (Namboku line) |
| S2 | Keisei-Ueno (Keisei line) | M2 | Nezu (Chiyoda line) |
| S3 | Okachimachi (JR line) | M3 | Hongo-sanchome (Marunouchi line) |
| S4 | Akihabara (JR line) | M4 | Yushima (Chiyoda line) |
| S5 | Ochanomizu (JR line) | M5 | Ochanomizu (Marunouchi line) |
| S6 | Suidobashi (JR line) | M6 | Shin-Ochanomizu (Chiyoda line) |
| Gate | Building & Hotel | ||
| G1 | Main gate | B1 | Faculty of Science Building I, Area W (We are Here) |
| G2 | Red gate (Akamon) | B2 | Yasuda Auditorium |
| G3 | Tatsuoka gate | B3 | University Hospital |
| G4 | Ikenohata gate | B4 | Sanjo Kaikan |
| G5 | Yayoi gate | B5 | HOTEL Kizankan |
| B6 | Hotel Park Side | ||
| B7 | Sanjo Kaikan annex | ||
| B8 | Sofitel Tokyo | ||
| B9 | Forest Hongo MAP |
